Pseudomonas poae RE_1-1-14, H045_15815

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas poae RE*1-1-14
GCF_000336465.1|latest
Locus Tag
H045_15815
Name
Replicon chromosome
Genomic location 3609356 - 3610414 (- strand)

Cross-References

RefSeq YP_007398724.1
GI 447918156
EC Number 2.7.7.7
Entrez 14504956
INSDC AGE27228.1
NCBI Locus Tag H045_15815
UniParc UPI0002AF4B85
UniProtKB Acc M4K284
UniProtKB ID M4K284_9PSED
UniRef100 UniRef100_M4K284
UniRef50 UniRef50_Q6D1H8
UniRef90 UniRef90_E2XXJ0

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA polymerase IV
Synonyms
Evidence for Translation
Charge (pH 7) 3.51
Kyte-Doolittle Hydrophobicity Value -0.310
Molecular Weight (kDa) 39292.4
Isoelectric Point (pI) 8.13

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 520 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000889 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: H045_15815
Search term: DNA polymerase IV

Human Homologs

Ensembl 110, assembly GRCh38.p14
DNA polymerase kappa [Source:HGNC Symbol;Acc:HGNC:9183]
E-value: 6.2e-41
Percent Identity: 32.6
Ensembl 110, assembly GRCh38.p14
DNA polymerase kappa [Source:HGNC Symbol;Acc:HGNC:9183]
E-value: 6.2e-41
Percent Identity: 32.6
Ensembl 110, assembly GRCh38.p14
DNA polymerase kappa [Source:HGNC Symbol;Acc:HGNC:9183]
E-value: 6.2e-41
Percent Identity: 32.6
Ensembl 110, assembly GRCh38.p14
DNA polymerase kappa [Source:HGNC Symbol;Acc:HGNC:9183]
E-value: 6.2e-41
Percent Identity: 32.6
Ensembl 110, assembly GRCh38.p14
DNA polymerase kappa [Source:HGNC Symbol;Acc:HGNC:9183]
E-value: 6.2e-41
Percent Identity: 32.6
Ensembl 110, assembly GRCh38.p14
DNA polymerase kappa [Source:HGNC Symbol;Acc:HGNC:9183]
E-value: 6.2e-41
Percent Identity: 32.6

References

No references are associated with this feature.