Pseudomonas protegens CHA0, PFLCHA0_c27770

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas protegens CHA0 - Assembly GCF_000397205.1
GCF_000397205.1|latest
Locus Tag
PFLCHA0_c27770
Name
Replicon chromosome
Genomic location 3043350 - 3044054 (+ strand)

Cross-References

RefSeq YP_008000052.1
GI 501680226
Entrez 15560693
NCBI Locus Tag PFLCHA0_c27770

Product

Feature Type CDS
Coding Frame 1
Product Name
NAD(P)H dehydrogenase, quinone family
Synonyms
Evidence for Translation
Charge (pH 7) -5.12
Kyte-Doolittle Hydrophobicity Value -0.039
Molecular Weight (kDa) 26316.9
Isoelectric Point (pI) 5.82

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 279 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000820 (1495 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLCHA0_c27770

Human Homologs

Ensembl 110, assembly GRCh38.p14
N-ribosyldihydronicotinamide:quinone reductase 2 [Source:HGNC Symbol;Acc:HGNC:7856]
E-value: 1.7e-42
Percent Identity: 42.1
Ensembl 110, assembly GRCh38.p14
N-ribosyldihydronicotinamide:quinone reductase 2 [Source:HGNC Symbol;Acc:HGNC:7856]
E-value: 1.7e-42
Percent Identity: 42.1
Ensembl 110, assembly GRCh38.p14
N-ribosyldihydronicotinamide:quinone reductase 2 [Source:HGNC Symbol;Acc:HGNC:7856]
E-value: 1.7e-42
Percent Identity: 42.1

References

No references are associated with this feature.