Pseudomonas protegens CHA0, PFLCHA0_c08620 (pnp)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas protegens CHA0 - Assembly GCF_000397205.1
GCF_000397205.1|latest
Locus Tag
PFLCHA0_c08620
Name
pnp
Replicon chromosome
Genomic location 981772 - 983877 (+ strand)

Cross-References

RefSeq YP_007998159.1
GI 501678333
EC Number 2.7.7.8
Entrez 15558778
NCBI Locus Tag PFLCHA0_c08620

Product

Feature Type CDS
Coding Frame 1
Product Name
polyribonucleotide nucleotidyltransferase Pnp
Synonyms
Evidence for Translation
Charge (pH 7) -17.14
Kyte-Doolittle Hydrophobicity Value -0.019
Molecular Weight (kDa) 74.9
Isoelectric Point (pI) 4.92

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 663 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004385 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLCHA0_c08620
Search term: pnp

Human Homologs

Ensembl 110, assembly GRCh38.p14
polyribonucleotide nucleotidyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23166]
E-value: 3.9e-111
Percent Identity: 35.5
Ensembl 110, assembly GRCh38.p14
polyribonucleotide nucleotidyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23166]
E-value: 3.9e-111
Percent Identity: 35.5

References

No references are associated with this feature.