Pseudomonas protegens Pf-5, PFL_5641

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5641
Name
Replicon chromosome
Genomic location 6424188 - 6426584 (- strand)

Cross-References

RefSeq YP_262700.1
GI 70732929
Entrez 3480016
INSDC AAY94834.1
NCBI Locus Tag PFL_5641
UniParc UPI000054E0CA
UniProtKB Acc Q4K4Y3
UniProtKB ID Q4K4Y3_PSEF5
UniRef100 UniRef100_Q4K4Y3
UniRef50 UniRef50_Q9I5T8
UniRef90 UniRef90_Q4K4Y3

Product

Feature Type CDS
Coding Frame 1
Product Name
sensory box histidine kinase
Synonyms
Evidence for Translation
Charge (pH 7) -8.54
Kyte-Doolittle Hydrophobicity Value -0.157
Molecular Weight (kDa) 89537.6
Isoelectric Point (pI) 6.05

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 494 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000583 (524 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5641

Human Homologs

References

No references are associated with this feature.