Pseudomonas protegens Pf-5, PFL_5507

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5507
Name
Replicon chromosome
Genomic location 6291084 - 6291875 (- strand)

Cross-References

RefSeq YP_262575.1
GI 70732808
Entrez 3479895
INSDC AAY94713.1
NCBI Locus Tag PFL_5507
UniParc UPI000054E056
UniProtKB Acc Q4K5A8
UniProtKB ID Q4K5A8_PSEF5
UniRef100 UniRef100_Q4K5A8
UniRef50 UniRef50_Q4K5A8
UniRef90 UniRef90_Q4K5A8

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -4.80
Kyte-Doolittle Hydrophobicity Value -0.392
Molecular Weight (kDa) 29085.5
Isoelectric Point (pI) 5.35

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 27 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004080 (358 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5507

Human Homologs

References

No references are associated with this feature.