Pseudomonas protegens Pf-5, PFL_5429 (hemL)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5429
Name
hemL
Replicon chromosome
Genomic location 6199275 - 6200558 (+ strand)

Cross-References

RefSeq YP_262497.1
GI 70732734
EC Number 5.4.3.8
Entrez 3479821
INSDC AAY94639.1
NCBI Locus Tag PFL_5429
UniParc UPI000054E008
UniProtKB Acc Q4K5I6
UniProtKB ID GSA_PSEF5
UniRef100 UniRef100_Q4K5I6
UniRef50 UniRef50_P42799
UniRef90 UniRef90_Q4K5I6

Product

Feature Type CDS
Coding Frame 1
Product Name
glutamate-1-semialdehyde aminotransferase
Synonyms
Evidence for Translation
Charge (pH 7) -8.81
Kyte-Doolittle Hydrophobicity Value 0.150
Molecular Weight (kDa) 45.2
Isoelectric Point (pI) 5.86

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 638 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001704 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5429
Search term: hemL

Human Homologs

References

No references are associated with this feature.