Pseudomonas protegens Pf-5, PFL_5327 (cgtA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5327
Name
cgtA
Replicon chromosome
Genomic location 6093744 - 6094967 (- strand)

Cross-References

RefSeq YP_262395.1
GI 70732632
Entrez 3479719
INSDC AAY94537.1
NCBI Locus Tag PFL_5327
UniParc UPI000054DFA5
UniProtKB Acc Q4K5T8
UniProtKB ID OBG_PSEF5
UniRef100 UniRef100_Q4K5T8
UniRef50 UniRef50_Q9KUS8
UniRef90 UniRef90_Q4K5T8

Product

Feature Type CDS
Coding Frame 1
Product Name
GTPase CgtA
Synonyms
Evidence for Translation
Charge (pH 7) -20.82
Kyte-Doolittle Hydrophobicity Value -0.477
Molecular Weight (kDa) 44.8
Isoelectric Point (pI) 4.53

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 667 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004225 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5327
Search term: cgtA
Search term: GTPase CgtA

Human Homologs

Ensembl 110, assembly GRCh38.p14
mitochondrial ribosome associated GTPase 2 [Source:HGNC Symbol;Acc:HGNC:16239]
E-value: 1.7e-50
Percent Identity: 39.8

References

No references are associated with this feature.