Pseudomonas protegens Pf-5, PFL_4962 (hscB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4962
Name
hscB
Replicon chromosome
Genomic location 5716074 - 5716595 (- strand)

Cross-References

RefSeq YP_262042.2
GI 161501964
Entrez 3479373
INSDC AAY94191.2
NCBI Locus Tag PFL_4962
UniParc UPI000160BD59
UniProtKB Acc Q4K6U1
UniProtKB ID Q4K6U1_PSEF5
UniRef100 UniRef100_Q4K6U1
UniRef50 UniRef50_Q886Z8
UniRef90 UniRef90_Q3K7A8

Product

Feature Type CDS
Coding Frame 1
Product Name
co-chaperone HscB
Synonyms
Evidence for Translation
Charge (pH 7) -9.33
Kyte-Doolittle Hydrophobicity Value -0.682
Molecular Weight (kDa) 20.2
Isoelectric Point (pI) 4.60

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 118 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001855 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4962
Search term: hscB
Search term: co-chaperone HscB

Human Homologs

References

No references are associated with this feature.