Pseudomonas protegens Pf-5, PFL_4897 (puuP)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4897
Name
puuP
Replicon chromosome
Genomic location 5639878 - 5641203 (- strand)

Cross-References

RefSeq YP_261978.1
GI 70732222
Entrez 3479308
INSDC AAY94127.1
NCBI Locus Tag PFL_4897
UniParc UPI000054DE05
UniProtKB Acc Q4K705
UniProtKB ID Q4K705_PSEF5
UniRef100 UniRef100_Q4K705
UniRef50 UniRef50_Q4K705
UniRef90 UniRef90_Q4K705

Product

Feature Type CDS
Coding Frame 1
Product Name
putrescine:hydrogen symporter PuuP
Synonyms
Evidence for Translation
Charge (pH 7) 6.57
Kyte-Doolittle Hydrophobicity Value 0.945
Molecular Weight (kDa) 47484.8
Isoelectric Point (pI) 9.20

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 442 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000219 (3043 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4897
Search term: puuP

Human Homologs

References

No references are associated with this feature.