Pseudomonas protegens Pf-5, PFL_4876

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4876
Name
Replicon chromosome
Genomic location 5620628 - 5621953 (+ strand)

Cross-References

RefSeq YP_261957.1
GI 70732201
Entrez 3479287
INSDC AAY94106.1
NCBI Locus Tag PFL_4876
UniParc UPI000054DDF0
UniProtKB Acc Q4K726
UniProtKB ID Q4K726_PSEF5
UniRef100 UniRef100_Q4K726
UniRef50 UniRef50_P10046
UniRef90 UniRef90_G8Q7X0

Product

Feature Type CDS
Coding Frame 1
Product Name
Fis family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -6.71
Kyte-Doolittle Hydrophobicity Value -0.236
Molecular Weight (kDa) 48.9
Isoelectric Point (pI) 5.87

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 623 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001271 (497 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4876

Human Homologs

References

No references are associated with this feature.