Pseudomonas protegens Pf-5, PFL_4721

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4721
Name
Replicon chromosome
Genomic location 5457984 - 5458430 (+ strand)

Cross-References

RefSeq YP_261804.1
GI 70728934
Entrez 3476665
INSDC AAY90839.1
NCBI Locus Tag PFL_4721
UniParc UPI000054DD58
UniProtKB Acc Q4K7H9
UniProtKB ID Q4K7H9_PSEF5
UniRef100 UniRef100_Q4K7H9
UniRef50 UniRef50_A7MLV9
UniRef90 UniRef90_Q4K7H9

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -2.53
Kyte-Doolittle Hydrophobicity Value 0.402
Molecular Weight (kDa) 16472.1
Isoelectric Point (pI) 5.23

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 211 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG013831 (380 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4721

Human Homologs

References

No references are associated with this feature.