Pseudomonas protegens Pf-5, PFL_4426 (cobQ)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4426
Name
cobQ
Replicon chromosome
Genomic location 5135197 - 5136648 (- strand)

Cross-References

RefSeq YP_261514.1
GI 70731772
EC Number 6.3.5.10
Entrez 3478545
INSDC AAY93677.1
NCBI Locus Tag PFL_4426
UniParc UPI000054DC38
UniProtKB Acc Q4K8B9
UniProtKB ID COBQ_PSEF5
UniRef100 UniRef100_Q4K8B9
UniRef50 UniRef50_Q4K8B9
UniRef90 UniRef90_Q4K8B9

Product

Feature Type CDS
Coding Frame 1
Product Name
cobyric acid synthase
Synonyms
Evidence for Translation
Charge (pH 7) -9.56
Kyte-Doolittle Hydrophobicity Value 0.064
Molecular Weight (kDa) 51564.6
Isoelectric Point (pI) 5.85

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 397 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001224 (530 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4426
Search term: cobQ

Human Homologs

References

No references are associated with this feature.