Pseudomonas protegens Pf-5, PFL_4328 (fumC_3)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4328
Name
fumC_3
Replicon chromosome
Genomic location 5032366 - 5033760 (+ strand)

Cross-References

RefSeq YP_261420.1
GI 70731678
EC Number 4.2.1.2
Entrez 3478451
INSDC AAY93583.1
NCBI Locus Tag PFL_4328
UniParc UPI000054DBDA
UniProtKB Acc Q4K8L3
UniProtKB ID Q4K8L3_PSEF5
UniRef100 UniRef100_Q4K8L3
UniRef50 UniRef50_P05042
UniRef90 UniRef90_Q4K8L3

Product

Feature Type CDS
Coding Frame 1
Product Name
fumarate hydratase
Synonyms
Evidence for Translation
Charge (pH 7) -8.59
Kyte-Doolittle Hydrophobicity Value -0.020
Molecular Weight (kDa) 49.3
Isoelectric Point (pI) 5.98

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 570 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000821 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4328
Search term: fumC_3

Human Homologs

Ensembl 110, assembly GRCh38.p14
fumarate hydratase [Source:HGNC Symbol;Acc:HGNC:3700]
E-value: 5.5e-146
Percent Identity: 57.9

References

No references are associated with this feature.