Pseudomonas protegens Pf-5, PFL_4198 (atuE)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4198
Name
atuE
Replicon chromosome
Genomic location 4884452 - 4885249 (+ strand)

Cross-References

RefSeq YP_261290.1
GI 70731549
EC Number 4.2.1.57
Entrez 3476936
INSDC AAY93454.1
NCBI Locus Tag PFL_4198
UniParc UPI000054DB58
UniProtKB Acc Q4K8Z3
UniProtKB ID Q4K8Z3_PSEF5
UniRef100 UniRef100_Q4K8Z3
UniRef50 UniRef50_Q4K8Z3
UniRef90 UniRef90_Q4K8Z3

Product

Feature Type CDS
Coding Frame 1
Product Name
isohexenylglutaconyl-CoA hydratase AtuE
Synonyms
Evidence for Translation
Charge (pH 7) 3.29
Kyte-Doolittle Hydrophobicity Value 0.123
Molecular Weight (kDa) 28.2
Isoelectric Point (pI) 8.24

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 498 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002683 (394 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4198
Search term: atuE

Human Homologs

References

No references are associated with this feature.