Pseudomonas protegens Pf-5, PFL_4097

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4097
Name
Replicon chromosome
Genomic location 4757632 - 4758363 (- strand)

Cross-References

RefSeq YP_261194.1
GI 70731453
Entrez 3476398
INSDC AAY93358.1
NCBI Locus Tag PFL_4097
UniParc UPI000054DAF9
UniProtKB Acc Q4K989
UniProtKB ID Q4K989_PSEF5
UniRef100 UniRef100_Q4K989
UniRef50 UniRef50_D7HYB7
UniRef90 UniRef90_Q4K989

Product

Feature Type CDS
Coding Frame 1
Product Name
thioesterase
Synonyms
Evidence for Translation
Charge (pH 7) 5.73
Kyte-Doolittle Hydrophobicity Value -0.122
Molecular Weight (kDa) 27119.1
Isoelectric Point (pI) 8.50

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 129 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003111 (772 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4097
Search term: thioesterase

Human Homologs

References

No references are associated with this feature.