Pseudomonas protegens Pf-5, PFL_4054 (ampC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4054
Name
ampC
Replicon chromosome
Genomic location 4666561 - 4667733 (+ strand)

Cross-References

RefSeq YP_261151.1
GI 70731410
EC Number 3.5.2.6
Entrez 3476355
INSDC AAY93315.1
NCBI Locus Tag PFL_4054
UniParc UPI000054DACF
UniProtKB Acc Q4K9D2
UniProtKB ID Q4K9D2_PSEF5
UniRef100 UniRef100_Q4K9D2
UniRef50 UniRef50_Q1LMH1
UniRef90 UniRef90_Q4K9D2

Product

Feature Type CDS
Coding Frame 1
Product Name
beta-lactamase
Synonyms
Evidence for Translation
Charge (pH 7) 2.12
Kyte-Doolittle Hydrophobicity Value -0.213
Molecular Weight (kDa) 42.1
Isoelectric Point (pI) 7.80

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 291 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001588 (493 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4054
Search term: ampC
Search term: beta-lactamase

Human Homologs

References

No references are associated with this feature.