Pseudomonas protegens Pf-5, PFL_3480

Gene Feature Overview

Strain	Pseudomonas protegens Pf-5 GCF_000012265.1|latest
Locus Tag	PFL_3480
Name
Replicon	chromosome
Genomic location	4000931 - 4002256 (- strand)

Cross-References

RefSeq	YP_260583.1
GI	70730842
Entrez	3475514
INSDC	AAY92747.1
NCBI Locus Tag	PFL_3480
UniParc	UPI000054D89C
UniProtKB Acc	Q4KB00
UniProtKB ID	Q4KB00_PSEF5
UniRef100	UniRef100_Q4KB00
UniRef50	UniRef50_O24842
UniRef90	UniRef90_Q4KB00

Product

Feature Type	CDS
Coding Frame	1
Product Name	aromatic acid:H+ symporter (AAHS) family MFS transporter
Synonyms
Evidence for Translation
Charge (pH 7)	11.79
Kyte-Doolittle Hydrophobicity Value	0.955
Molecular Weight (kDa)	46092.4
Isoelectric Point (pI)	10.48

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 368 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004525 (370 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PFL_3480 Search term: aromatic acid:H+ symporter (AAHS) family MFS transporter

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000479104 SV2 related protein [Source:HGNC Symbol;Acc:HGNC:25417] E-value: 3.8e-19 Percent Identity: 25.2

References