Pseudomonas protegens Pf-5, PFL_3301

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_3301
Name
Replicon chromosome
Genomic location 3808708 - 3810537 (+ strand)

Cross-References

RefSeq YP_260406.1
GI 70730665
Entrez 3476311
INSDC AAY92570.1
NCBI Locus Tag PFL_3301
UniParc UPI000054D7EB
UniProtKB Acc Q4KBH7
UniProtKB ID Q4KBH7_PSEF5
UniRef100 UniRef100_Q4KBH7
UniRef50 UniRef50_Q3KE81
UniRef90 UniRef90_Q4KBH7

Product

Feature Type CDS
Coding Frame 1
Product Name
ABC transporter substrate-binding protein
Synonyms
Evidence for Translation
Charge (pH 7) 10.89
Kyte-Doolittle Hydrophobicity Value -0.354
Molecular Weight (kDa) 69675.7
Isoelectric Point (pI) 9.51

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 438 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003587 (525 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_3301

Human Homologs

References

No references are associated with this feature.