Pseudomonas protegens Pf-5, PFL_3242 (oprN)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_3242
Name
oprN
Replicon chromosome
Genomic location 3741600 - 3743021 (+ strand)

Cross-References

RefSeq YP_260347.1
GI 70730606
Entrez 3477862
INSDC AAY92511.1
NCBI Locus Tag PFL_3242
UniParc UPI000054D7B0
UniProtKB Acc Q4KBN6
UniProtKB ID Q4KBN6_PSEF5
UniRef100 UniRef100_Q4KBN6
UniRef50 UniRef50_Q88HD3
UniRef90 UniRef90_Q4KBN6

Product

Feature Type CDS
Coding Frame 1
Product Name
multidrug efflux RND transporter, outer membrane factor lipoprotein OprN
Synonyms
Evidence for Translation
Charge (pH 7) -6.76
Kyte-Doolittle Hydrophobicity Value -0.284
Molecular Weight (kDa) 51244.9
Isoelectric Point (pI) 4.97

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 298 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003062 (529 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_3242
Search term: oprN

Human Homologs

References

No references are associated with this feature.