Pseudomonas protegens Pf-5, PFL_3232

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_3232
Name
Replicon chromosome
Genomic location 3727618 - 3728640 (- strand)

Cross-References

RefSeq YP_260337.1
GI 70730596
Entrez 3477852
INSDC AAY92501.1
NCBI Locus Tag PFL_3232
UniParc UPI000054D7A6
UniProtKB Acc Q4KBP6
UniProtKB ID Q4KBP6_PSEF5
UniRef100 UniRef100_Q4KBP6
UniRef50 UniRef50_Q9I0Z1
UniRef90 UniRef90_Q4KBP6

Product

Feature Type CDS
Coding Frame 1
Product Name
zinc-binding dehydrogenase family oxidoreductase
Synonyms
Evidence for Translation
Charge (pH 7) -7.25
Kyte-Doolittle Hydrophobicity Value 0.079
Molecular Weight (kDa) 37.0
Isoelectric Point (pI) 5.40

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 491 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003064 (524 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_3232

Human Homologs

References

No references are associated with this feature.