Pseudomonas protegens Pf-5, PFL_3223

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_3223
Name
Replicon chromosome
Genomic location 3716921 - 3717682 (+ strand)

Cross-References

RefSeq YP_260328.1
GI 70730587
Entrez 3477843
INSDC AAY92492.1
NCBI Locus Tag PFL_3223
UniParc UPI000054D79D
UniProtKB Acc Q4KBQ5
UniProtKB ID Q4KBQ5_PSEF5
UniRef100 UniRef100_Q4KBQ5
UniRef50 UniRef50_A0Z7Y3
UniRef90 UniRef90_Q4KBQ5

Product

Feature Type CDS
Coding Frame 1
Product Name
3-ketoacyl-ACP reductase
Synonyms
Evidence for Translation
Charge (pH 7) -2.55
Kyte-Doolittle Hydrophobicity Value 0.263
Molecular Weight (kDa) 26247.7
Isoelectric Point (pI) 5.30

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 652 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000180 (2633 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_3223

Human Homologs

Ensembl 110, assembly GRCh38.p14
hydroxysteroid 17-beta dehydrogenase 8 [Source:HGNC Symbol;Acc:HGNC:3554]
E-value: 1.1e-20
Percent Identity: 31.9
Ensembl 110, assembly GRCh38.p14
hydroxysteroid 17-beta dehydrogenase 8 [Source:HGNC Symbol;Acc:HGNC:3554]
E-value: 1.1e-20
Percent Identity: 31.9
Ensembl 110, assembly GRCh38.p14
hydroxysteroid 17-beta dehydrogenase 8 [Source:HGNC Symbol;Acc:HGNC:3554]
E-value: 1.1e-20
Percent Identity: 31.9
Ensembl 110, assembly GRCh38.p14
hydroxysteroid 17-beta dehydrogenase 8 [Source:HGNC Symbol;Acc:HGNC:3554]
E-value: 1.1e-20
Percent Identity: 31.9
Ensembl 110, assembly GRCh38.p14
hydroxysteroid 17-beta dehydrogenase 8 [Source:HGNC Symbol;Acc:HGNC:3554]
E-value: 1.1e-20
Percent Identity: 31.9
Ensembl 110, assembly GRCh38.p14
hydroxysteroid 17-beta dehydrogenase 8 [Source:HGNC Symbol;Acc:HGNC:3554]
E-value: 1.1e-20
Percent Identity: 31.9

References

No references are associated with this feature.