Pseudomonas protegens Pf-5, PFL_3126

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_3126
Name
Replicon chromosome
Genomic location 3596371 - 3598518 (- strand)

Cross-References

RefSeq YP_260232.2
GI 346642981
EC Number 3.1.4.3
Entrez 3477297
INSDC AAY92396.2
NCBI Locus Tag PFL_3126
UniParc UPI000219FFD9
UniProtKB Acc Q4KC01
UniProtKB ID Q4KC01_PSEF5
UniRef100 UniRef100_Q4KC01
UniRef50 UniRef50_Q3JI69
UniRef90 UniRef90_Q4KC01

Product

Feature Type CDS
Coding Frame 1
Product Name
phospholipase C, phosphocholine-specific
Synonyms
Evidence for Translation
Charge (pH 7) 7.67
Kyte-Doolittle Hydrophobicity Value -0.422
Molecular Weight (kDa) 78.5
Isoelectric Point (pI) 8.43

Subcellular localization

Individual Mappings
Localization Confidence PMID
Extracellular Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 95 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002303 (317 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_3126

Human Homologs

References

No references are associated with this feature.