Pseudomonas protegens Pf-5, PFL_3043 (arnB)

Gene Feature Overview

Strain	Pseudomonas protegens Pf-5 GCF_000012265.1|latest
Locus Tag	PFL_3043
Name	arnB
Replicon	chromosome
Genomic location	3508945 - 3510084 (+ strand)

Cross-References

RefSeq	YP_260149.2
GI	346642971
EC Number	2.6.1.-
Entrez	3475936
INSDC	AAY92313.2
NCBI Locus Tag	PFL_3043
UniParc	UPI00005EE295
UniProtKB Acc	Q4KC84
UniProtKB ID	ARNB_PSEF5
UniRef100	UniRef100_Q4KC84
UniRef50	UniRef50_Q7AC24
UniRef90	UniRef90_Q4KC84

Product

Feature Type	CDS
Coding Frame	1
Product Name	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase
Synonyms
Evidence for Translation
Charge (pH 7)	-7.75
Kyte-Doolittle Hydrophobicity Value	-0.015
Molecular Weight (kDa)	41.6
Isoelectric Point (pI)	6.01

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 558 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG002114 (610 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PFL_3043 Search term: arnB Search term: UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase

Human Homologs

References