Pseudomonas protegens Pf-5, PFL_2868

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_2868
Name
Replicon chromosome
Genomic location 3203967 - 3205376 (- strand)

Cross-References

RefSeq YP_259974.1
GI 70730235
EC Number 2.6.1.-
Entrez 3477939
INSDC AAY92140.1
NCBI Locus Tag PFL_2868
UniParc UPI000054D641
UniProtKB Acc Q4KCQ9
UniProtKB ID Q4KCQ9_PSEF5
UniRef100 UniRef100_Q4KCQ9
UniRef50 UniRef50_Q4KCQ9
UniRef90 UniRef90_Q4KCQ9

Product

Feature Type CDS
Coding Frame 1
Product Name
GntR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 4.51
Kyte-Doolittle Hydrophobicity Value -0.106
Molecular Weight (kDa) 52.1
Isoelectric Point (pI) 8.32

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 618 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001567 (527 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_2868

Human Homologs

References

No references are associated with this feature.