Pseudomonas protegens Pf-5, PFL_2748

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_2748
Name
Replicon chromosome
Genomic location 3040804 - 3041415 (- strand)

Cross-References

RefSeq YP_259855.1
GI 70730116
Entrez 3477021
INSDC AAY92021.1
NCBI Locus Tag PFL_2748
UniParc UPI000054D5DA
UniProtKB Acc Q4KD28
UniProtKB ID Q4KD28_PSEF5
UniRef100 UniRef100_Q4KD28
UniRef50 UniRef50_Q3KBC0
UniRef90 UniRef90_Q4KD28

Product

Feature Type CDS
Coding Frame 1
Product Name
general secretion protein J
Synonyms
Evidence for Translation
Charge (pH 7) 2.24
Kyte-Doolittle Hydrophobicity Value -0.545
Molecular Weight (kDa) 22890.8
Isoelectric Point (pI) 9.62

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 46 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000656 (743 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_2748

Human Homologs

References

No references are associated with this feature.