Pseudomonas protegens Pf-5, PFL_2716

Gene Feature Overview

Strain	Pseudomonas protegens Pf-5 GCF_000012265.1|latest
Locus Tag	PFL_2716
Name
Replicon	chromosome
Genomic location	2997672 - 2998376 (+ strand)

Cross-References

RefSeq	YP_259823.2
GI	346642939
Entrez	3477165
INSDC	AAY91989.2
NCBI Locus Tag	PFL_2716
UniParc	UPI00021A001A
UniProtKB Acc	Q4KD60
UniProtKB ID	Q4KD60_PSEF5
UniRef100	UniRef100_Q4KD60
UniRef50	UniRef50_A6VD92
UniRef90	UniRef90_Q4KD60

Product

Feature Type	CDS
Coding Frame	1
Product Name	NAD(P)H dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7)	-5.12
Kyte-Doolittle Hydrophobicity Value	-0.039
Molecular Weight (kDa)	26316.9
Isoelectric Point (pI)	5.82

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 279 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000820 (1495 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PFL_2716 Search term: NAD(P)H dehydrogenase

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000337773 N-ribosyldihydronicotinamide:quinone reductase 2 [Source:HGNC Symbol;Acc:HGNC:7856] E-value: 1.7e-42 Percent Identity: 42.1
Ensembl 110, assembly GRCh38.p14	ENSP00000369822 N-ribosyldihydronicotinamide:quinone reductase 2 [Source:HGNC Symbol;Acc:HGNC:7856] E-value: 1.7e-42 Percent Identity: 42.1
Ensembl 110, assembly GRCh38.p14	ENSP00000369795 N-ribosyldihydronicotinamide:quinone reductase 2 [Source:HGNC Symbol;Acc:HGNC:7856] E-value: 1.7e-42 Percent Identity: 42.1

References