Pseudomonas protegens Pf-5, PFL_1918 (ccoP_1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1918
Name
ccoP_1
Replicon chromosome
Genomic location 2139621 - 2140598 (- strand)

Cross-References

RefSeq YP_259037.1
GI 70729300
EC Number 1.9.3.1
Entrez 3477609
INSDC AAY91205.1
NCBI Locus Tag PFL_1918
UniParc UPI000054D2B2
UniProtKB Acc Q4KFE6
UniProtKB ID Q4KFE6_PSEF5
UniRef100 UniRef100_Q4KFE6
UniRef50 UniRef50_Q9I3G5
UniRef90 UniRef90_Q4KFE6

Product

Feature Type CDS
Coding Frame 1
Product Name
cytochrome c oxidase, cbb3-type subunit III
Synonyms
Evidence for Translation
Charge (pH 7) -4.20
Kyte-Doolittle Hydrophobicity Value -0.217
Molecular Weight (kDa) 35.6
Isoelectric Point (pI) 6.09

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 215 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003807 (889 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1918
Search term: ccoP_1

Human Homologs

References

No references are associated with this feature.