Pseudomonas protegens Pf-5, PFL_1598

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1598
Name
Replicon chromosome
Genomic location 1794223 - 1794852 (+ strand)

Cross-References

RefSeq YP_258724.2
GI 346642816
Entrez 3477259
INSDC AAY90895.2
NCBI Locus Tag PFL_1598
UniParc UPI000219FF4D
UniProtKB Acc Q4KGA9
UniProtKB ID Q4KGA9_PSEF5
UniRef100 UniRef100_Q4KGA9
UniRef50 UniRef50_A0A0B7D8M5
UniRef90 UniRef90_Q4KGA9

Product

Feature Type CDS
Coding Frame 1
Product Name
Sua5/YciO/YrdC/YwlC family protein
Synonyms
Evidence for Translation
Charge (pH 7) -3.89
Kyte-Doolittle Hydrophobicity Value -0.003
Molecular Weight (kDa) 22.9
Isoelectric Point (pI) 5.63

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 578 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002416 (533 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1598

Human Homologs

References

No references are associated with this feature.