Pseudomonas protegens Pf-5, PFL_1593

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1593
Name
Replicon chromosome
Genomic location 1791158 - 1791835 (- strand)

Cross-References

RefSeq YP_258719.1
GI 70728985
Entrez 3477254
INSDC AAY90890.1
NCBI Locus Tag PFL_1593
UniParc UPI000054D177
UniProtKB Acc Q4KGB4
UniProtKB ID Q4KGB4_PSEF5
UniRef100 UniRef100_Q4KGB4
UniRef50 UniRef50_Q4KGB4
UniRef90 UniRef90_Q4KGB4

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA-binding response regulator
Synonyms
Evidence for Translation
Charge (pH 7) -5.92
Kyte-Doolittle Hydrophobicity Value -0.175
Molecular Weight (kDa) 25.0
Isoelectric Point (pI) 5.16

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 622 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002411 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1593

Human Homologs

References

No references are associated with this feature.