Pseudomonas protegens Pf-5, PFL_1507 (ptrB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1507
Name
ptrB
Replicon chromosome
Genomic location 1689932 - 1691986 (- strand)

Cross-References

RefSeq YP_258634.2
GI 346642805
EC Number 3.4.21.83
Entrez 3475427
INSDC AAY90790.2
NCBI Locus Tag PFL_1507
UniParc UPI000219FF2A
UniProtKB Acc Q4KGJ9
UniProtKB ID Q4KGJ9_PSEF5
UniRef100 UniRef100_Q4KGJ9
UniRef50 UniRef50_Q4KGJ9
UniRef90 UniRef90_Q4KGJ9

Product

Feature Type CDS
Coding Frame 1
Product Name
protease 2
Synonyms
Evidence for Translation
Charge (pH 7) -32.82
Kyte-Doolittle Hydrophobicity Value -0.306
Molecular Weight (kDa) 76166.6
Isoelectric Point (pI) 4.59

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 327 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001247 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1507
Search term: ptrB
Search term: protease 2

Human Homologs

Ensembl 110, assembly GRCh38.p14
prolyl endopeptidase [Source:HGNC Symbol;Acc:HGNC:9358]
E-value: 3.9e-55
Percent Identity: 26.3

References

No references are associated with this feature.