Pseudomonas protegens Pf-5, PFL_1467 (cupB5)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1467
Name
cupB5
Replicon chromosome
Genomic location 1647390 - 1650425 (+ strand)

Cross-References

RefSeq YP_258594.1
GI 70728845
Entrez 3475756
INSDC AAY90750.1
NCBI Locus Tag PFL_1467
UniParc UPI000054D0FA
UniProtKB Acc Q4KGN9
UniProtKB ID Q4KGN9_PSEF5
UniRef100 UniRef100_Q4KGN9
UniRef50 UniRef50_Q4KGN9
UniRef90 UniRef90_Q4KGN9

Product

Feature Type CDS
Coding Frame 1
Product Name
adhesive protein CupB5
Synonyms
Evidence for Translation
Charge (pH 7) 3.18
Kyte-Doolittle Hydrophobicity Value -0.028
Molecular Weight (kDa) 101.3
Isoelectric Point (pI) 8.64

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 144 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001605 (334 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1467
Search term: cupB5

Human Homologs

References

No references are associated with this feature.