Pseudomonas protegens Pf-5, PFL_1466

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1466
Name
Replicon chromosome
Genomic location 1645563 - 1647314 (+ strand)

Cross-References

RefSeq YP_258593.1
GI 70728844
Entrez 3475755
INSDC AAY90749.1
NCBI Locus Tag PFL_1466
UniParc UPI000054D0F9
UniProtKB Acc Q4KGP0
UniProtKB ID Q4KGP0_PSEF5
UniRef100 UniRef100_Q4KGP0
UniRef50 UniRef50_Q4KGP0
UniRef90 UniRef90_Q4KGP0

Product

Feature Type CDS
Coding Frame 1
Product Name
OMP85 family outer membrane protein
Synonyms
Evidence for Translation
Charge (pH 7) -8.57
Kyte-Doolittle Hydrophobicity Value -0.397
Molecular Weight (kDa) 64.1
Isoelectric Point (pI) 5.13

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 164 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000040 (1614 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1466

Human Homologs

References

No references are associated with this feature.