Pseudomonas protegens Pf-5, PFL_1257

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1257
Name
Replicon chromosome
Genomic location 1429092 - 1430657 (- strand)

Cross-References

RefSeq YP_258386.1
GI 70728637
Entrez 3475685
INSDC AAY90542.1
NCBI Locus Tag PFL_1257
UniParc UPI000054D02D
UniProtKB Acc Q4KH97
UniProtKB ID Q4KH97_PSEF5
UniRef100 UniRef100_Q4KH97
UniRef50 UniRef50_Q88N61
UniRef90 UniRef90_G8PW58

Product

Feature Type CDS
Coding Frame 1
Product Name
AmpG-like permease
Synonyms
Evidence for Translation
Charge (pH 7) 8.13
Kyte-Doolittle Hydrophobicity Value 0.732
Molecular Weight (kDa) 56.7
Isoelectric Point (pI) 9.49

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 247 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003983 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1257

Human Homologs

References

No references are associated with this feature.