Pseudomonas protegens Pf-5, PFL_1157

Gene Feature Overview

Strain	Pseudomonas protegens Pf-5 GCF_000012265.1|latest
Locus Tag	PFL_1157
Name
Replicon	chromosome
Genomic location	1322847 - 1323935 (+ strand)

Cross-References

RefSeq	YP_258288.1
GI	70728539
Entrez	3478974
INSDC	AAY90444.1
NCBI Locus Tag	PFL_1157
UniParc	UPI000054CFCB
UniProtKB Acc	Q4KHJ5
UniProtKB ID	Q4KHJ5_PSEF5
UniRef100	UniRef100_Q4KHJ5
UniRef50	UniRef50_Q4KHJ5
UniRef90	UniRef90_Q4KHJ5

Product

Feature Type	CDS
Coding Frame	1
Product Name	RND family efflux transporter MFP subunit
Synonyms
Evidence for Translation
Charge (pH 7)	3.18
Kyte-Doolittle Hydrophobicity Value	-0.252
Molecular Weight (kDa)	39.5
Isoelectric Point (pI)	8.88

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 453 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000154 (998 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PFL_1157 Search term: RND family efflux transporter MFP subunit

Human Homologs

References