Pseudomonas protegens Pf-5, PFL_1067

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1067
Name
Replicon chromosome
Genomic location 1217749 - 1218867 (+ strand)

Cross-References

RefSeq YP_258198.1
GI 70728449
Entrez 3477478
INSDC AAY90354.1
NCBI Locus Tag PFL_1067
UniParc UPI000054CF71
UniProtKB Acc Q4KHT5
UniProtKB ID Q4KHT5_PSEF5
UniRef100 UniRef100_Q4KHT5
UniRef50 UniRef50_Q4KHT5
UniRef90 UniRef90_Q4KHT5

Product

Feature Type CDS
Coding Frame 1
Product Name
permease, YjgP/YjgQ family
Synonyms
Evidence for Translation
Charge (pH 7) 6.48
Kyte-Doolittle Hydrophobicity Value 0.304
Molecular Weight (kDa) 41.5
Isoelectric Point (pI) 9.74

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 267 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001837 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1067

Human Homologs

References

No references are associated with this feature.