Pseudomonas protegens Pf-5, PFL_1050 (aapM)

Gene Feature Overview

Strain	Pseudomonas protegens Pf-5 GCF_000012265.1|latest
Locus Tag	PFL_1050
Name	aapM
Replicon	chromosome
Genomic location	1201736 - 1202833 (+ strand)

Cross-References

RefSeq	YP_258181.1
GI	70728432
Entrez	3477500
INSDC	AAY90337.1
NCBI Locus Tag	PFL_1050
UniParc	UPI000054CF60
UniProtKB Acc	Q4KHV2
UniProtKB ID	Q4KHV2_PSEF5
UniRef100	UniRef100_Q4KHV2
UniRef50	UniRef50_Q5E4L7
UniRef90	UniRef90_Q4KHV2

Product

Feature Type	CDS
Coding Frame	1
Product Name	general L-amino acid ABC transporter permease AapM
Synonyms
Evidence for Translation
Charge (pH 7)	14.03
Kyte-Doolittle Hydrophobicity Value	0.704
Molecular Weight (kDa)	40.5
Isoelectric Point (pI)	9.96

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 444 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001275 (1254 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PFL_1050 Search term: aapM Search term: general L-amino acid ABC transporter permease AapM

Human Homologs

References