Pseudomonas protegens Pf-5, PFL_1024 (algD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1024
Name
algD
Replicon chromosome
Genomic location 1173724 - 1175040 (- strand)

Cross-References

RefSeq YP_258155.1
GI 70728406
EC Number 1.1.1.132
Entrez 3477513
INSDC AAY90311.1
NCBI Locus Tag PFL_1024
UniParc UPI000054CF46
UniProtKB Acc Q4KHX8
UniProtKB ID Q4KHX8_PSEF5
UniRef100 UniRef100_Q4KHX8
UniRef50 UniRef50_Q887P8
UniRef90 UniRef90_Q4KHX8

Product

Feature Type CDS
Coding Frame 1
Product Name
GDP-mannose 6-dehydrogenase AlgD
Synonyms
Evidence for Translation
Charge (pH 7) -10.60
Kyte-Doolittle Hydrophobicity Value -0.015
Molecular Weight (kDa) 47.6
Isoelectric Point (pI) 5.02

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 588 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002126 (490 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1024
Search term: algD

Human Homologs

References

No references are associated with this feature.