Pseudomonas protegens Pf-5, PFL_0932

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0932
Name
Replicon chromosome
Genomic location 1072919 - 1075024 (- strand)

Cross-References

RefSeq YP_258063.2
GI 346642743
Entrez 3475460
INSDC AAY90219.2
NCBI Locus Tag PFL_0932
UniParc UPI000219FF15
UniProtKB Acc Q4KI70
UniProtKB ID Q4KI70_PSEF5
UniRef100 UniRef100_Q4KI70
UniRef50 UniRef50_E2XLA4
UniRef90 UniRef90_Q4KI70

Product

Feature Type CDS
Coding Frame 1
Product Name
TonB-dependent outermembrane receptor
Synonyms
Evidence for Translation
Charge (pH 7) -7.88
Kyte-Doolittle Hydrophobicity Value -0.498
Molecular Weight (kDa) 77397.3
Isoelectric Point (pI) 6.19

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 296 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000149 (2669 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0932

Human Homologs

References

No references are associated with this feature.