Pseudomonas protegens Pf-5, PFL_0862

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0862
Name
Replicon chromosome
Genomic location 997596 - 999137 (+ strand)

Cross-References

RefSeq YP_257994.1
GI 70734354
Entrez 3481442
INSDC AAY96259.1
NCBI Locus Tag PFL_0862
UniParc UPI000054CEA6
UniProtKB Acc Q4KID9
UniProtKB ID Q4KID9_PSEF5
UniRef100 UniRef100_Q4KID9
UniRef50 UniRef50_L8F5G2
UniRef90 UniRef90_E2XLF6

Product

Feature Type CDS
Coding Frame 1
Product Name
PhoD family protein
Synonyms
Evidence for Translation
Charge (pH 7) -8.60
Kyte-Doolittle Hydrophobicity Value -0.423
Molecular Weight (kDa) 57846.7
Isoelectric Point (pI) 5.53

Subcellular localization

Individual Mappings
Localization Confidence PMID
Extracellular Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 160 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001766 (433 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0862

Human Homologs

References

No references are associated with this feature.