Pseudomonas protegens Pf-5, PFL_0595

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0595
Name
Replicon chromosome
Genomic location 693692 - 694594 (- strand)

Cross-References

RefSeq YP_257737.1
GI 70734097
Entrez 3481184
INSDC AAY96002.1
NCBI Locus Tag PFL_0595
UniParc UPI000054CDA5
UniProtKB Acc Q4KJ46
UniProtKB ID Q4KJ46_PSEF5
UniRef100 UniRef100_Q4KJ46
UniRef50 UniRef50_Q48NY0
UniRef90 UniRef90_Q4KJ46

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -5.26
Kyte-Doolittle Hydrophobicity Value -0.323
Molecular Weight (kDa) 34622.2
Isoelectric Point (pI) 6.23

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 490 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000439 (1015 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0595

Human Homologs

References

No references are associated with this feature.