Pseudomonas protegens Pf-5, PFL_0302 (rfbD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0302
Name
rfbD
Replicon chromosome
Genomic location 350808 - 351689 (- strand)

Cross-References

RefSeq YP_257448.1
GI 70733808
EC Number 1.1.1.133
Entrez 3480895
INSDC AAY95713.1
NCBI Locus Tag PFL_0302
UniParc UPI000054CC85
UniProtKB Acc Q4KJY5
UniProtKB ID Q4KJY5_PSEF5
UniRef100 UniRef100_Q4KJY5
UniRef50 UniRef50_Q4KJY5
UniRef90 UniRef90_Q4KJY5

Product

Feature Type CDS
Coding Frame 1
Product Name
dTDP-4-dehydrorhamnose reductase
Synonyms
Evidence for Translation
Charge (pH 7) -6.92
Kyte-Doolittle Hydrophobicity Value -0.232
Molecular Weight (kDa) 32336.3
Isoelectric Point (pI) 5.58

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 499 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004753 (531 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0302
Search term: rfbD

Human Homologs

References

No references are associated with this feature.