Pseudomonas protegens Pf-5, PFL_0276 (ompR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0276
Name
ompR
Replicon chromosome
Genomic location 323039 - 323779 (+ strand)

Cross-References

RefSeq YP_257422.1
GI 70733782
Entrez 3480869
INSDC AAY95687.1
NCBI Locus Tag PFL_0276
UniParc UPI000054CC6B
UniProtKB Acc Q4KK11
UniProtKB ID Q4KK11_PSEF5
UniRef100 UniRef100_Q4KK11
UniRef50 UniRef50_Q4KK11
UniRef90 UniRef90_Q4KK11

Product

Feature Type CDS
Coding Frame 1
Product Name
osmolarity response regulator
Synonyms
Evidence for Translation
Charge (pH 7) -0.78
Kyte-Doolittle Hydrophobicity Value -0.287
Molecular Weight (kDa) 27.4
Isoelectric Point (pI) 6.09

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 625 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004784 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0276
Search term: ompR

Human Homologs

References

No references are associated with this feature.