Pseudomonas protegens Pf-5, PFL_0200

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0200
Name
Replicon chromosome
Genomic location 235406 - 236086 (+ strand)

Cross-References

RefSeq YP_257346.1
GI 70733706
Entrez 3480793
INSDC AAY95611.1
NCBI Locus Tag PFL_0200
UniParc UPI000054CC1F
UniProtKB Acc Q4KK87
UniProtKB ID Q4KK87_PSEF5
UniRef100 UniRef100_Q4KK87
UniRef50 UniRef50_Q44006
UniRef90 UniRef90_Q4KK87

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA-binding heavy metal response regulator
Synonyms
Evidence for Translation
Charge (pH 7) -2.28
Kyte-Doolittle Hydrophobicity Value -0.008
Molecular Weight (kDa) 25.4
Isoelectric Point (pI) 5.81

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 621 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001354 (1369 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0200

Human Homologs

References

No references are associated with this feature.