Pseudomonas sp. UW4, PputUW4_04869 (rplF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. UW4
GCF_000316175.1|latest
Locus Tag
PputUW4_04869
Name
rplF
Replicon chromosome
Genomic location 5563666 - 5564199 (- strand)

Cross-References

RefSeq YP_007031864.1
GI 426411765
Entrez 14055135
INSDC AFY22059.1
NCBI Locus Tag PputUW4_04869
UniParc UPI00019DADB6
UniProtKB Acc K9NQP1
UniProtKB ID K9NQP1_9PSED
UniRef100 UniRef100_C3K2W1
UniRef50 UniRef50_P49548
UniRef90 UniRef90_Q889V6

Product

Feature Type CDS
Coding Frame 1
Product Name
50S ribosomal protein L6
Synonyms
Evidence for Translation
Charge (pH 7) 7.47
Kyte-Doolittle Hydrophobicity Value -0.382
Molecular Weight (kDa) 19.2
Isoelectric Point (pI) 10.26

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 642 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001462 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputUW4_04869
Search term: rplF

Human Homologs

References

No references are associated with this feature.