Pseudomonas sp. UW4, PputUW4_01995

Gene Feature Overview

Strain	Pseudomonas sp. UW4 GCF_000316175.1|latest
Locus Tag	PputUW4_01995
Name
Replicon	chromosome
Genomic location	2332137 - 2332802 (- strand)

Cross-References

RefSeq	YP_007029004.1
GI	426408905
EC Number	2.8.3.5
Entrez	14051370
INSDC	AFY19199.1
NCBI Locus Tag	PputUW4_01995
UniParc	UPI00026FDE33
UniProtKB Acc	K9NHF1
UniProtKB ID	K9NHF1_9PSED
UniRef100	UniRef100_K9NHF1
UniRef50	UniRef50_Q4KEA4
UniRef90	UniRef90_Q4KEA4

Product

Feature Type	CDS
Coding Frame	1
Product Name	succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B
Synonyms
Evidence for Translation
Charge (pH 7)	-9.34
Kyte-Doolittle Hydrophobicity Value	0.237
Molecular Weight (kDa)	23.4
Isoelectric Point (pI)	4.47

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 279 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003435 (528 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PputUW4_01995 Search term: succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000196371 3-oxoacid CoA-transferase 1 [Source:HGNC Symbol;Acc:HGNC:8527] E-value: 5.6e-56 Percent Identity: 50.5
Ensembl 110, assembly GRCh38.p14	ENSP00000425348 3-oxoacid CoA-transferase 1 [Source:HGNC Symbol;Acc:HGNC:8527] E-value: 5.6e-56 Percent Identity: 50.5

References