Pseudomonas sp. UW4, PputUW4_00710 (pnp)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. UW4
GCF_000316175.1|latest
Locus Tag
PputUW4_00710
Name
pnp
Replicon chromosome
Genomic location 849571 - 851676 (+ strand)

Cross-References

RefSeq YP_007027722.1
GI 426407623
EC Number 2.7.7.8
Entrez 14053138
INSDC AFY17917.1
NCBI Locus Tag PputUW4_00710
UniParc UPI0002703745
UniProtKB Acc K9NE91
UniProtKB ID K9NE91_9PSED
UniRef100 UniRef100_A0A0A6DHV5
UniRef50 UniRef50_Q3IJ73
UniRef90 UniRef90_Q87WQ8

Product

Feature Type CDS
Coding Frame 1
Product Name
polynucleotide phosphorylase/polyadenylase
Synonyms
Evidence for Translation
Charge (pH 7) -16.14
Kyte-Doolittle Hydrophobicity Value -0.018
Molecular Weight (kDa) 74.8
Isoelectric Point (pI) 4.95

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 663 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004385 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputUW4_00710
Search term: pnp

Human Homologs

Ensembl 110, assembly GRCh38.p14
polyribonucleotide nucleotidyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23166]
E-value: 4.6e-112
Percent Identity: 35.7
Ensembl 110, assembly GRCh38.p14
polyribonucleotide nucleotidyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23166]
E-value: 4.6e-112
Percent Identity: 35.7

References

No references are associated with this feature.