Pseudomonas sp. UW4, PputUW4_00548 (fis)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. UW4
GCF_000316175.1|latest
Locus Tag
PputUW4_00548
Name
fis
Replicon chromosome
Genomic location 629319 - 629639 (- strand)

Cross-References

RefSeq YP_007027561.1
GI 426407462
Entrez 14052894
INSDC AFY17756.1
NCBI Locus Tag PputUW4_00548
UniParc UPI00029D0CCA
UniProtKB Acc K9NCI3
UniProtKB ID K9NCI3_9PSED
UniRef100 UniRef100_A0A083UT98
UniRef50 UniRef50_Q5QVV0
UniRef90 UniRef90_I4CPV3

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA-binding protein Fis
Synonyms
Evidence for Translation
Charge (pH 7) -1.32
Kyte-Doolittle Hydrophobicity Value -0.289
Molecular Weight (kDa) 11.7
Isoelectric Point (pI) 6.24

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 194 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004482 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputUW4_00548
Search term: fis

Human Homologs

References

No references are associated with this feature.