Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a5500

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a5500
Name
Replicon chromosome
Genomic location 6635471 - 6637141 (- strand)

Cross-References

RefSeq YP_004357029.1
GI 330812567
Entrez 10474800
INSDC AEA72025.1
NCBI Locus Tag PSEBR_a5500
UniParc UPI0002041F3E
UniProtKB Acc F2K6U8
UniProtKB ID F2K6U8_PSEBN
UniRef100 UniRef100_A0A0D0T448
UniRef50 UniRef50_A0A0B7DH21
UniRef90 UniRef90_A0A0D0T448

Product

Feature Type CDS
Coding Frame 1
Product Name
diguanylate cyclase/phosphodiesterase
Synonyms
Evidence for Translation
Charge (pH 7) -14.29
Kyte-Doolittle Hydrophobicity Value -0.098
Molecular Weight (kDa) 61.9
Isoelectric Point (pI) 5.38

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 452 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004870 (523 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a5500

Human Homologs

References

No references are associated with this feature.