Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a5321

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a5321
Name
Replicon chromosome
Genomic location 6443963 - 6444649 (+ strand)

Cross-References

RefSeq YP_004356826.1
GI 330812364
Entrez 10474597
INSDC AEA71822.1
NCBI Locus Tag PSEBR_a5321
UniParc UPI0002041872
UniProtKB Acc F2K695
UniProtKB ID F2K695_PSEBN
UniRef100 UniRef100_F2K695
UniRef50 UniRef50_P52055
UniRef90 UniRef90_K0WMI5

Product

Feature Type CDS
Coding Frame 1
Product Name
alanine racemase
Synonyms
Evidence for Translation
Charge (pH 7) -0.86
Kyte-Doolittle Hydrophobicity Value -0.093
Molecular Weight (kDa) 24615.7
Isoelectric Point (pI) 6.68

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 566 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000385 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a5321
Search term: alanine racemase

Human Homologs

Ensembl 110, assembly GRCh38.p14
pyridoxal phosphate binding protein [Source:HGNC Symbol;Acc:HGNC:9457]
E-value: 2.8e-26
Percent Identity: 39.5

References

No references are associated with this feature.