Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a5243

Gene Feature Overview

Strain	Pseudomonas brassicacearum subsp. brassicacearum NFM421 GCF_000194805.1|latest
Locus Tag	PSEBR_a5243
Name
Replicon	chromosome
Genomic location	6352824 - 6353771 (+ strand)

Cross-References

RefSeq	YP_004356735.1
GI	330812273
Entrez	10474506
INSDC	AEA71731.1
NCBI Locus Tag	PSEBR_a5243
UniParc	UPI00020415C1
UniProtKB Acc	F2K604
UniProtKB ID	F2K604_PSEBN
UniRef100	UniRef100_A0A0D0SKR1
UniRef50	UniRef50_D5AQ73
UniRef90	UniRef90_G8Q2G4

Product

Feature Type	CDS
Coding Frame	1
Product Name	glycine/betaine/L-proline ABC transporter periplasmic protein
Synonyms
Evidence for Translation
Charge (pH 7)	-0.58
Kyte-Doolittle Hydrophobicity Value	-0.203
Molecular Weight (kDa)	34.2
Isoelectric Point (pI)	6.55

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 129 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004940 (511 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSEBR_a5243 Search term: glycine/betaine/L-proline ABC transporter periplasmic protein

Human Homologs

References